CDS

Accession Number TCMCG035C40316
gbkey CDS
Protein Id XP_021601460.1
Location join(233380..234407,235205..235457,235459..236829,237473..237862,238000..241191)
Gene LOC110606778
GeneID 110606778
Organism Manihot esculenta

Protein

Length 2077aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA394209
db_source XM_021745768.1
Definition LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH12-like [Manihot esculenta]

EGGNOG-MAPPER Annotation

COG_category A
Description U5 small nuclear ribonucleoprotein 200 kDa
KEGG_TC -
KEGG_Module M00354        [VIEW IN KEGG]
M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12854        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000245        [VIEW IN EMBL-EBI]
GO:0000354        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005682        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045292        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046540        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0097526        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCACCTTGGCGGTGGTGCGGAAGCACACGCCCGATTTAAGCAGTATGAGTATCGAGCAAACTCTAGTTTGGTCCTTACCACCGACTCTCGCCCGCGTGACACCCATGAGCCCACCGGTGAGCCCGAGTCGCTTTGGGGCAAGATTGATCCTAAAAGCTTCGGTGACCGTGCTTATAGAGGCAGACCTCCTGAGTTAGACGAGAAGATTAAGAAATCTAAGAAGAAGAAGGAGCGTGACTCACTCTCAGAGCCTGTTCCCAGTCGCCAAGCTAAGAAGCGTCGCCTCAGAGAAGAGAGTGTACTCACTTCTACGGAGGAAGGCGTTTACCAGCCCAAAACAAAGGAGACTAGAGCTGCATATGAGGCCATGCTCAGCATCATTCAACAGCATTTGGGTGGTCAGCCTCTCAATATTGTTAGCGCAGCTGCTGATGAGATTTTGGCTGTCCTCAAGAATGAATCCGTTAAGACCCCTGACAAGAAGAAGGAGATTGAGAAGTTGTTGAATCCTATTCCCAATCATGTGTTCGATCAGCTTGTTTCTATTGGCAGGCTTATAACTGATTTCCAAGACGGGGGTGATGCTGCAGGGCCTGCTGTGGCCAACGGTGATGATGCCCTTGATGATGATGTGGGTGTGGCTGTTGAGTTTGATGAAGACAACGAGGATGATGAAGAAGAGAGCGATCTTGATGCTGTTCCCGACGAGGCAGAAGAAGATGATGATGTGGCAGAGCCTAATGGTTCAGGGGCAATGCAGATGGGTGGTGGAATCGATGATGAAGACATGCAGGATGCAAATGAGGGCATGGGCCTTAATGTGCAGGATATTGATGCCTATTGGCTGCAAAGGAAGATCTCACAAGCTTATGAACAACAGATTGACCCTCAACAGTGCCAAAAATTGGCAGAGGAGGTGCTTAAAATACTTGCCGAGGGTGATGACAGGGAAGTTGAAAACAAGTTGCTCGTGCATCTCCAGTTTGAAAAGTTCAGCCTCATTAAATTTCTTTTGCGTAACAGTTTTGAGCAAGGTGGTCTTTTGATGGCAAATAAAAAATGTGATCTTCCCGTTGGTTCCTACAGACACCAAAGCAAGGGTTATGAAGAAGTTCATGTGCCAGCCTTGAAGCCTAAACCAGTAGCACCTGATGAGAAGCTGGTGAAGATATCTGACATGCCAGACTGGGCACAACCGGCTTTCAAAGGGATGCAACAGTTGAACAGGGTGCAGAGTAGAGTGTACGAGACTGCCCTTTTTAAGGCAGATAATGTCCTTCTTTGTGCCCCTACTGGGGCAGGGAAGACTAATGTTGCAGTACTCACCATACTTCAGCAAATTGCATTGAATAGGAATCCAGATGGTTCATTTAACCATGGCAACTATAAGATAGTCTATGTTGCACCTATGAAAGCTCTTGTGGCTGAAGTTGTTGGTAATTTGTCAAATCGATTGCAGGAGTATGGTGTCAAGGTTAGGGAGCTAAGTGGAGACCAGACATTGACACGTCAACAAATTGAAGAAACTCAAATTATTGTGACTACCCCTGAGAAATGGGACATTATTACCCGAAAGTCTGGGGATCGCACTTACACACAGCTTGTGAAACTTCTTATTATTGATGAAATTCATCTCCTCCATGATAACAGAGGACCTGTGCTTGAGAGTATCGTTGCTAGAACTGTGAGGCAAATTGAAACAACAAAAGAACACATCCGGCTGGTGGGATTATCTGCTACACTGCCTAATTTTGAAGACGTGGCTCTCTTTTTAAGGGTTGATATTGAAAGAGGACTCTTCCATTTTGATAATAGCTATAGACCTGTTCCTCTTTCTCAACAGTACATTGGAATCACAGTGAAGAAGCCACTGCAGAGGTTTCAGTTGATGAATGATATCTGTTATGAGAAGGTAATGACTGTAGCAGGAAAGCATCAAGTTCTTATTTTTGTCCACTCTAGAAAGGAAACAGCAAAGACAGCTCGTGCAATTCGGGATGCTGCACTTGCTAATGATACTCTTGGTAGATTCTTAAGGGAAGATAGTGCAAGCCGGGAGATTCTGCAAAGTCATACGGATATGGTCAAAAGCAATGATCTGAAAGATCTGTTGCCCTATGGTTTTGCAGTTCATCATGCTGGAATGACAAGGGTTGACCGTCAACTTGTTGAAGATCTTTTTGCAGATGGGCATGTACAAGTGCTGGTTTCCACTGCAACTCTTGCTTGGGGTGTTAACTTGCCTGCTCATACTGTGATTATCAAAGGGACTCAGATTTACAATCCAGAAAAAGGAGCGTGGACTGAGCTAAGTCCTTTGGATGTTATGCAGATGCTTGGTCGTGCAGGAAGGCCTCAATATGATTCTTACGGAGAAGGAATTATCATCACTGGCCACAGTGAACTTCAGTACTACCTGTCTTTAATGAATCAACAGCTTCCTATTGAAAGTCAGTTTGTATCCAAACTGGCCGATCAATTGAATGCAGAAATTGTTCTTGGAACCGTTCAAAATGCTAGAGACGCCTGCAATTGGCTTGGCTATACTTACTTGTATGTCCGTATGCTGCGAAATCCTACTCTATATGGCTTAGCACCAGATGTTCTCACCAGAGATATTACATTGGAGGTGAGGAGGGCTGATTTGATTCATTCTGCTGCAACTATCTTGGACAAAAATAATCTGGTCAAGTATGACAGGAAAAGTGGATATTTCCAGGTCACTGACTTGGGTCGCATTGCTAGCTATTACTATATAACTCATGGGACCATATCCACATATAATGAGCACCTGAAGCCAACAATGGGGGACATAGAGCTATGCCGTCTGTTCTCACTAAGTGAAGAATTTAAATATGTAACAGTGAGACAAGATGAGAAGATGGAACTGGCAAAGCTTTTGGACCGTGTTCCAATTCCAATCAAGGAAAGTCTGGAAGAGCCTAGTGCTAAGATTAACGTCTTGCTTCAAGCCTATATTTCACAGCTTAAGCTTGAAGGGCTTTCCCTGACATCAGACATGGTGTTCATAACTCAGAGTGCTGGCCGTCTTATGCGAGCTCTTTTTGAGATTGTCTTGAAAAGGGGATGGGCACAATTAGCCGAGAAGGCTCTAAATTTGTGTAAAATGGTGAACAAGAGGATGTGGAGTGTCCAAACACCCCTGCGTCAATTCAGTGGGATCCCAAATGAAATTCTGATGAAGTTGGAGAAGAAAGATTTGGCTTGGGAAAGATATTATGACCTTTCATCACAGGAAATTGGTGAGCTCATTCGTTTCCCAAAGATGGGAAGAACATTGCATAAGTTCATTCACCAATTCCCAAAGCTCAACCTGGCAGCACATGTTCAACCAATCACTCGTACAGTGTTGAGGGTTGAACTTACTATAACACCAGATTTTCAGTGGGAGGACAAAGTTCATGGATATGTGGAGCCATTTTGGGTCATTGTGGAAGATAATGATGGTGAATGCATTCTGCATTATGAGTACTTTATGTTGAAGAAGCAGTACATTGATGAGGACCACACATTGAACTTCACAGTGCCAATTTATGAGCCATTGCCACCTCAATATTTCATCCGTGTTGTGTCAGATAAATGGCTCGGGTCACAAACTGTTTTACCTGTTTCTTTTAGGCATCTCATTTTACCAGAAAAGTATCCTCCACCCACAGAGTTACTGGATTTGCAACCTCTGCCTGTGACTGCTTTGAGGAATCCGTCATATGAAGCTCTTTATCAGGATTTTAAACATTTTAATCCTGTCCAAACTCAGGTCTTTACTGTTCTATATAATACAGATGACAATGTATTGGTTGCTGCACCAACAGGGAGTGGAAAAACCATATGTGCTGAATTTGCTCTATTGAGGAATTATCAGAAGGGACCTGATAGTGTAATGCGTGCTGTTTATATTGCACCTCTTGAAGCAATTGCTAAGGAACGCTATCATGATTGGGAGAGAAAGTTTGGTCGAGGTCTTGGCATGCGCGTTGTTGAACTGACTGGAGAAACAGCGACAGATTTAAAACTTCTTGAAAAGGGTCAAATAATTATCAGCACTCCAGAAAAATGGGATGCTTTGTCTCGTCGCTGGAAACAGCGGAAGTATGTGCAGCAGGTTAGTCTGTTTATCATTGATGAGCTCCACCTAATTGGTGGGCAAGGAGGTCCTGTCTTGGAGGTTATTGTTTCTAGAATGAGATATATTGCTAGTCAGATAGAGAACAAGATTCGAATTGTGGCATTGTCATCTTCTCTTGCAAATGCCAAGGATCTCGGAGAATGGATAGGAGCCACTTCCCATGGCCTTTTCAATTTCCCTCCTGGGGTGCGTCCTGTCCCCTTAGAAATACACATTCAGGGAGTAGATATTGCCAATTTTGAAGCAAGGATACAGGCCATGACAAAACCAACATACACTGCAATAGTCCAACATGCCAAAAATGAAAAGCCTGCTATTGTGTTTGTTCCAACGAGGAAGCATGTGCGACTCACTGCAGTGGATCTGATGACATACTCAAGTGTGGACAGTGGAGAGAAACCTGCTTTTTTGTTGCGGTCCTCAGAAGAGCTGGAACCATTTGTTGGCAAGATTCAGGATGAAATGTTGAGGGCCACTTTGCTTCATGGGGTTGGTTATTTGCACGAGGGCTTGGGTAGTTTGGATCAAGAAGTTGTGTCACAGCTGTTTGAAGCTGGGTGGATTCAGGTTTGTGTCATGAGCAGCTCAATGTGTTGGGGAGTGCCCTTGTCAGCGCATTTGGTGGTTGTGATGGGAACTCAATATTATGATGGGCGTGAAAATGCTCATACTGATTACCCTGTTACAGATCTCTTGCAGATGATGGGTCATGCCAGTCGACCTCTACTAGATAACTCTGGGAAGTGTGTCATCCTCTGCCATGCACCTCGTAAAGAGTATTACAAGAAATTCTTATATGAAGCTTTCCCTGTAGAAAGCCATTTGCATCATTTCCTGCATGACAATTTTAATGCAGAAATAGTTGCTGGAGTTGTTGAAAACAAGCAAGATGCAGTAGATTATCTTACTTGGACATTTATGTATAGGCGTCTCACTCAGAATCCTAATTACTACAATCTCCAGGGAGTTGGTCATAGACATCTTTCTGATCACCTTTCGGAGCTTGTTGAGAACACATTAAGTGATCTAGAAGCAGGTAAATGTGTTGCTATTGAGGACGACATGGACCTCTCTCCACTGAATCTTGGCATGATAGCATCATACTACTACATCAGTTATACTACTATTGAGCGTTTTAGTAGTTCTTTGACTCCCAAGACAAGGATGAAGGGTCTTCTGGAAATTCTGGCTTCAGCTTCGGAGTATGCCCTTCTTCCTGTACGACCTGGAGAGGAAGAGGTGCTTCGGCGGCTGATCAATCACCAGAGGTTCTCATTTGAGAATTCCCGTTATGCTGATCCACATGTGAAGGCAAATGTACTGCTACAAGCCCATTTCTCAAGGCAGTCTGTGGGTGGAAACCTTGCACTGGACCAACGAGAGGTGCTTCTTTCAGCCAGTAGATTGCTCCAAGCAATGGTTGATGTCATTTCAAGCAATGGCTGGTTAAGCCTTGCTCTTCTTGCTATGGAAGTTAGCCAGATGGTGACTCAGGGGATGTGGGAGCGTGATTCGATGCTTTTACAGCTTCCACACTTCACAAAGGAATTGGCGAAAAAATGCCAAGAGAATCCTGGAAAGAGTATAGAGACAGTATTTGATTTGGTAGAGATGGAAGATGATGAAAGGCGGGAGCTTCTCCAGATGTCAGATTCACAGTTGCTGGATATTGTGAGGTTCTGCAACCGCTTCCCCAACATTGATATGTCGTATGAGGTGATGGATGGTGAGCATGTGAAGGCTGGAGAAGATATTACTTTGCTGGTTACTCTGGAACGGGATCTAGAAGGGAGGACAGACGTGGGAACCATTGATGCTCCCAGGTATCCTAAAGCCAAAGAAGAAGGCTGGTGGCTTGTTGTTGGTGATACCAAGAGCAACCAGTTGCTTGCCATCAAGAGGGTTTCTCTCCAAAGGAAGTCAAAGGTGAAGCTTGAGTTCGCTGCCCCCTCAGAAGCTGGAAGGAAATCATACACACTATATTTCATGTGTGATTCTTATCTGGGCTGTGACCAAGAATATGGCTTCAGCGTTGATGTCAAAGAAGCAGGTGGTTCAGATGAGGACTGCGCGAGAGAGTAA
Protein:  
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKSFGDRAYRGRPPELDEKIKKSKKKKERDSLSEPVPSRQAKKRRLREESVLTSTEEGVYQPKTKETRAAYEAMLSIIQQHLGGQPLNIVSAAADEILAVLKNESVKTPDKKKEIEKLLNPIPNHVFDQLVSIGRLITDFQDGGDAAGPAVANGDDALDDDVGVAVEFDEDNEDDEEESDLDAVPDEAEEDDDVAEPNGSGAMQMGGGIDDEDMQDANEGMGLNVQDIDAYWLQRKISQAYEQQIDPQQCQKLAEEVLKILAEGDDREVENKLLVHLQFEKFSLIKFLLRNSFEQGGLLMANKKCDLPVGSYRHQSKGYEEVHVPALKPKPVAPDEKLVKISDMPDWAQPAFKGMQQLNRVQSRVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALNRNPDGSFNHGNYKIVYVAPMKALVAEVVGNLSNRLQEYGVKVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNFEDVALFLRVDIERGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMTVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLGRFLREDSASREILQSHTDMVKSNDLKDLLPYGFAVHHAGMTRVDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARDACNWLGYTYLYVRMLRNPTLYGLAPDVLTRDITLEVRRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVNKRMWSVQTPLRQFSGIPNEILMKLEKKDLAWERYYDLSSQEIGELIRFPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGECILHYEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFALLRNYQKGPDSVMRAVYIAPLEAIAKERYHDWERKFGRGLGMRVVELTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSSSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARIQAMTKPTYTAIVQHAKNEKPAIVFVPTRKHVRLTAVDLMTYSSVDSGEKPAFLLRSSEELEPFVGKIQDEMLRATLLHGVGYLHEGLGSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEIVAGVVENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVGHRHLSDHLSELVENTLSDLEAGKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTPKTRMKGLLEILASASEYALLPVRPGEEEVLRRLINHQRFSFENSRYADPHVKANVLLQAHFSRQSVGGNLALDQREVLLSASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIVRFCNRFPNIDMSYEVMDGEHVKAGEDITLLVTLERDLEGRTDVGTIDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFAAPSEAGRKSYTLYFMCDSYLGCDQEYGFSVDVKEAGGSDEDCARE